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Page "Linkage isomerism" ¶ 6
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isomerization and isomer
From a kinetic standpoint, cis-trans proline isomerization is a very slow process that can impede the progress of protein folding by trapping one or more proline residues crucial for folding in the non-native isomer, especially when the native protein requires the cis isomer.
The target product 1, 4-butanediol and its isomer is obtained with isomerization free catalysts such as rhodium-triphenylphosphine complexes.
This observation is rationalized: the bis ( phosphine ) complex can undergo cis-trans isomerization to give the sterically favored trans isomer.
Phototherapy works through a process of isomerization that changes trans-bilirubin into the water-soluble cis-bilirubin isomer.

isomerization and >
In E-Z isomerization, the thermal equilibrium lies well towards the trans-form because of its lower energy (~ 15 kJ mol < sup >− 1 </ sup > in stilbene ).
The activation energy for thermal E-Z isomerization is 150-190 kJ mol < sup >− 1 </ sup > for stilbene, meaning that temperatures above 200 ° C are required to isomerize stilbene at a reasonable rate, but most derivatives have lower energy barriers ( e. g. 65 kJ mol < sup >− 1 </ sup > for 4-aminostilbene ).

isomerization and complex
The use of the cobalt complex leads by isomerization of the double bond to n-propanal.
* Both organic ligands are trans oriented and convert to cis in a trans-cis isomerization to produce complex D.

isomerization and II
Metarhodopsin II is an intermediate of rhodopsin isomerization from 11-cis-retinal to all-trans-retinal after photon-absorption by the 11-cis-retinal.
The original synthesis started by the Eglinton reaction of the di-alkyne 1, 5-hexadiyne with copper ( II ) acetate in pyridine to give the trimer, followed by deprotonation and isomerization with potassium tert-butoxide in tert-butanol and was concluded with hydrogen organic reduction with the Lindlar catalyst.

isomerization and ),
Both of these mechanisms for lowering the activation energy have been observed in peptidyl prolyl isomerases ( PPIases ), which are naturally occurring enzymes that catalyze the cis-trans isomerization of X-Pro peptide bonds.
This process consists of three steps: hydrocyanation of butadiene to a mixture of 2-methyl-3-butenenitrile ( 2M3BM ) and 3-pentenenitrile ( 3PN ), an isomerization step from 2M3BM ( not desired ) to 3PN and a second hydrocyanation ( aided by a Lewis acid cocatalyst such as aluminium trichloride or triphenylboron ) to adiponitrile.

isomerization and ligands
The resulting ligands will be mutually cis, although subsequent isomerization may occur.

isomerization and can
However, the activation energy can be lowered ( and the isomerization catalyzed ) by changes that favor the single-bonded form, such as placing the peptide group in a hydrophobic environment or donating a hydrogen bond to the nitrogen atom of an X-Pro peptide group.
These reactions can entail cis-trans isomerization.
Light therapy is used to treat cases of neonatal jaundice through the isomerization of the bilirubin and consequently transformation into compounds that the newborn can excrete via urine and stools.
The most common example is E-stilbene, which upon irradiation undergoes an E to Z isomerization, which can be followed by a 6π electrocyclization.
This means that their isomerization in a solid matrix can take place much more quickly than with most other photochromic molecules.
These properties can be readily controlled by reversible isomerization between the open-and closed-ring states using photoirradiation, and thus they have been suggested for use in optical data storage and 3D optical data storage in particular.
Low temperatures and high carbon monoxide pressure and an excess of phosphine, which blocks free coordination sites, can lead to faster hydroformylation in the α-position to the ester group and suppress the isomerization.
Ferrierite-H can be used as a catalyst in the chemical industry for the acid-catalyzed skeletal isomerization of n-butenes to isobutene, the raw material for production of methyl tert-butyl ether ( MTBE ).
The quantum yield of isomerization can be strongly dependent on conditions ( see below ).
However, some diarylethenes have so little shape change upon isomerization that they can be converted while remaining in crystalline form.
They differ from other chiral compounds in that they can be equilibrated thermally whereas in the other forms of chirality isomerization is usually only possible chemically.

isomerization and be
However, these studies too are disputed since allyl-alcohols may be sensitive to isomerization reactions, and different stereoisomers may be formed from those reactions and not from the standard Wacker process.
Following isomerization and release from the opsin protein, all-trans retinal is reduced to all-trans retinol and travels back to the retinal pigment epithelium to be " recharged ".
Atroposelective synthesis may be carried out by use of chiral auxiliaries like a CBS catalyst in the total synthesis of knipholone or by approaches based on thermodynamic equilibration when an isomerization reaction favors one atropisomer over the other.

isomerization and due
When studied outside the cell, the slowest folding proteins require many minutes or hours to fold primarily due to proline isomerization, and must pass through a number of intermediate states, like checkpoints, before the process is complete.

isomerization and .
Only one molecule is involved in a unimolecular reaction ; it is transformed by an isomerization or a dissociation in one or more other molecules.
A typical example of a unimolecular reaction is the cis – trans isomerization, in which the cis-form of a compound converts to the trans-form or vice versa.
All organisms possess prolyl isomerase enzymes to catalyze this isomerization, and some bacteria have specialized prolyl isomerases associated with the ribosome.
Caramelization is the removal of water from a sugar, proceeding to isomerization and polymerization of the sugars into various high-molecular-weight compounds.
These changes include loss of hydrogen, oxygen, nitrogen, and sulfur, which leads to loss of other functional groups that further promote isomerization and aromatization which are associated with increasing depth or burial.
The common disaccharides lactose and maltose are directly detected by Benedict's reagent, because each contains a glucose with a free reducing aldehyde moiety, after isomerization.
% concentrations of species in isomerization reaction.
In the third step, an isomerization step protonates the nitrogen atom leading to the amide.
These reactions include cis-trans isomerization, cycloaddition to other ( ground state ) alkene to give cyclobutane derivatives.
The cis-trans isomerization of a ( poly ) alkene is involved in retinal, a component of the machinery of vision.
The light causes isomerization of retinal from 11-cis to all-trans.
The rate limiting step is the isomerization of IGP.
In some cases protonation induces isomerization, however.
* EC 5. 2 includes enzymes that catalyze the isomerization of geometric isomers ( cis-trans isomerases )
# Upon strong binding, myosin and actin undergo an isomerization ( myosin rotates at the myosin-actin interface ) extending an extensible region in the neck of the myosin head.
One method of MDA synthesis is to turn safrole into isosafrole via isomerization.
Isomerases catalyze isomerization changes within a single molecule.
The reaction mechanism is detailed in Figure 1, and the base that initiates the isomerization and NH groups that stabilize the intermediate are located on the active site of enoyl-coA isomerase.

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