Phylogenetic analyses place these genera into the following groups ( not all of these are considered amoeboid ( or " amoebas ") by all sources ):

Phylogenetic analyses have become essential in researching the evolutionary tree of life.

Phylogenetic analyses based on 79 ribosomal proteins indicated a position of Sipuncula within Annelida.

Phylogenetic analyses support Vitaceae as the sister-group to all other rosids ( Jansen et al.

Phylogenetic analyses of Vitis ( Vitaceae ) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids.

Phylogenetic analyses of ITS, nuclear large subunit and mitochondrial small subunit rDNA sequences from a variety of North American species has delineated five distinct clades within the core Laetiporus clade ; sulphureus clade I contains white-pored L. sulphureus isolates, while sulphureus clade II contains yellow-pored L. sulphureus isolates.

Phylogenetic analyses shows the Sclerodermataceae, Boletinellaceae and Gyroporaceae appear to form a discrete group within the Boletales, and together with the Pisolithaceae, the Astraceae and the Calostomaceae, are grouped under the suborder Sclerodermatineae.

Phylogenetic analyses of sequences of five plastid DNA regions, rbcL, rps4, trnL – F, matK, and rps16, confirm most aspects of the traditional classification of the Iridaceae in four subfamilies and the evolutionary patterns that they imply, importantly the sister relationship of Isophysidoideae to the remainder of the family and the monophyly of Iridoideae.

Phylogenetic analyses of D-loop DNA sequences of various lemur species suggests that the gray mouse lemur may be most closely related to the reddish-gray mouse lemur ( M. griseorufus ).

Phylogenetic analyses using homologous sequences from all extant edentate groups indicates that the Mylodontidae were closer related to Megalonychidae than to Bradypodidae.

Phylogenetic relationships of oryzomyine rodents ( Muroidea: Sigmodontinae ): separate and combined analyses of morphological and molecular data.

Phylogenetic analyses of internal transcribed spacer 1 sequences revealed a clade composed of all North American sequences plus a subset of Italian and French sequences.

Phylogenetic analyses of ITS, nuclear large subunit and mitochondrial small subunit rDNA sequences from a variety of North American species have delineated five distinct clades within the core Laetiporus clade:

Phylogenetic analysis by Chris Organ, Charles Nunn, Zarin Machanda, and Richard Wrangham suggests that cooking may have been invented as far back as 1. 8 million to 2. 3 million years ago.

Phylogenetic studies have not indicated a correlation between evolution of Sodalis and tsetse.

Phylogenetic studies generally have shown the clouded leopard ( Neofelis nebulosa ) is basal to this group.

Phylogenetic or typological comparisons of creole languages have led to divergent conclusions.

Phylogenetic studies using mtDNA suggest that some morphological features have evolved more than once including the back and chin colour.

Phylogenetic analysis of the RNA and protein sequences of poliovirus ( PV ) suggests that PV may have evolved from a C-cluster coxsackie A virus ancestor, that arose through a mutation within the capsid.

Phylogenetic algorithms that permit the comparison of homologies led to phylogenetic trees that have a similar topology, independent of the gene analyzed.

Phylogenetic studies strongly suggest that PVs normally evolve together with their mammalian and bird host species, do not change host species, do not recombine, and have maintained their basic genomic organization for a period exceeding 100 million years.

Phylogenetic relationships among neogastropod superfamilies based on morphological characters are rather unstable, and for instance, Cancellarioidea or Buccinoidea have been alternatively proposed as the sister group of the remaining Neogastropoda.

Phylogenetic trees based on 16S rRNA sequences have shown that the genus Actinomyces is quite diverse, exhibiting polyphyletic branching into several clusters.

Phylogenetic studies have demonstrated that this broadly defined Loganiaceae was a polyphyletic assemblage, and numerous genera have been removed from Loganiaceae to other families ( sometimes in other orders ), e. g., Gentianaceae, Gelsemiaceae, Plocospermataceae, Tetrachondraceae, Buddlejaceae, and Gesneriaceae.

Phylogenetic studies have also demonstrated that the ancestor of Androsace first appeared about 35 Mya ago and was most probably an annual species.

Phylogenetic trees built on each of the 8 segments show a consistent picture of 3 lineages, as illustrated by the HA tree shown in Figure 1.

Phylogenetic analysis of 26 Chordopoxviruses genomes has shown that the central region of the genome is conserved and contains ~ 90 genes.

Phylogenetic relationships between these families are difficult to determine.

Phylogenetic analysis, however, indicates that the monocots are a development from a dicot ancestor.

Phylogenetic trees of species and higher taxa are used to study the evolution of traits ( e. g., anatomical or molecular characteristics ) and the distribution of organisms ( biogeography ).

Phylogenetic analysis identified seven genotypes of yellow fever viruses, and it is assumed that they are differently adapted to humans and to the vector Aedes aegypti.

Phylogenetic groups are given definitions based on their relationship to one another, rather than purely on physical traits such as the presence of a backbone.

Phylogenetic analysis of the 18S ribosomal gene has revealed that the Acanthocephala are most closely related to the rotifers.

Phylogenetic estimates constructed with bacteria, plastids, and eukaryotic genomes also suggest that plastids are most closely related to cyanobacteria.

Phylogenetic studies indicate that Shigella is more appropriately treated as subgenus of Escherichia, and that certain strains generally considered E. coli – such as E. coli O157: H7 – are better placed in Shigella ( see Escherichia coli # Diversity for details ).

Phylogenetic trees among a nontrivial number of input sequences are constructed using computational phylogenetics methods.

Phylogenetic networks are used when bifurcating trees are not suitable, due to these complications which suggest a more reticulate evolutionary history of the organisms sampled ..

Phylogenetic research revealed the important impact of the subfamily Polycnemoideae on the classification ( see Cladogram ): If Polycnemoideae are considered being part of Chenopodiaceae, then Amaranthaceae ( s. str.

Phylogenetic Position of the Tubercle Bacilli within the Genus Mycobacterium The blue triangle corresponds to tubercle bacilli sequences that are identical or differing by a single nucleotide.

Phylogenetic trees are typically created from DNA, RNA or protein sequence data.

Comparisons of species are used to examine interspecific or evolutionary allometry ( see also Phylogenetic comparative methods ).